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Plot MFI value distribution for a given analyte

Usage

plot_mfi_for_analyte(
  plate,
  analyte_name,
  data_type = "Median",
  plot_type = "violin",
  scale_y = "log10",
  plot_outliers = FALSE
)

Arguments

plate

A plate object

analyte_name

The analyte to plot

data_type

The type of data to plot. Default is "Median"

plot_type

The type of plot to generate. Default is "violin". Available options are "boxplot" and "violin".

scale_y

What kind of transformation of the scale to apply. By default MFI is presented in a "log10" scale. Available options are described in the documentation of scale_y_continuous undertransform parameter.

plot_outliers

When using "boxplot" type of a plot one can set this parameter to TRUE and display the names of samples for which MFI falls outside the 1.5 IQR interval

Value

A ggplot object