Plot layout of a 96-well plate — plot

This is a function used to plot the layout of a 96-well plate using a color to represent the sample types.

If plot window is resized, it's best to re-run the function to adjust the scaling. Sometimes when legend is plotted, whole layout may be shifted, then it's best to stretch the window, and everything will be adjusted automatically.

plot_layout(plate, plot_legend = TRUE)

Arguments

plate: The plate object with the layout information
plot_legend: Logical indicating if the legend should be plotted

Value

A ggplot object

Examples

plate_filepath <- system.file("extdata", "CovidOISExPONTENT_CO.csv",
  package = "PvSTATEM", mustWork = TRUE
)
layout_filepath <- system.file("extdata", "CovidOISExPONTENT_CO_layout.xlsx",
  package = "PvSTATEM", mustWork = TRUE
)
plate <- read_luminex_data(plate_filepath, layout_filepath)
#> Reading Luminex data from: /home/runner/work/_temp/Library/PvSTATEM/extdata/CovidOISExPONTENT_CO.csv
#> using format xPONENT
#> (WARNING)
#> Number of layout fields is higher than the number of samples. Please check the layout file. Using only first 49 dilutions from the layout file. 
#> 
#> New plate object has been created with name: CovidOISExPONTENT_CO!
#> 
plot_layout(plate = plate, plot_legend = TRUE)